Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Scube3Q66PY1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.88□□□□□ -0.19
Scube3Q66PY1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scube3Q66PY1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm8805-201ENSMUST00000117848 313 ntBASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm12203-201ENSMUST00000118235 598 ntBASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm13369-201ENSMUST00000119442 987 ntBASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm12209-201ENSMUST00000120089 596 ntBASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Mir7221-201ENSMUST00000184009 72 ntBASIC13.87□□□□□ -0.19
Scube3Q66PY1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scube3Q66PY1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.86□□□□□ -0.19
Scube3Q66PY1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm11618-201ENSMUST00000117946 267 ntBASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm27331-201ENSMUST00000183705 60 ntBASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.86□□□□□ -0.19
Scube3Q66PY1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.86□□□□□ -0.19
Scube3Q66PY1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scube3Q66PY1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.85□□□□□ -0.19
Scube3Q66PY1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Mir874-201ENSMUST00000104769 76 ntBASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scube3Q66PY1 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms