Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn9aQ62205 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn9aQ62205 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm13035-201ENSMUST00000117496 342 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm14999-201ENSMUST00000121039 624 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm11675-201ENSMUST00000121873 832 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm38210-201ENSMUST00000191944 809 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm37905-201ENSMUST00000195310 341 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm7666-201ENSMUST00000146631 819 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.13■□□□□ 0.01
Scn9aQ62205 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn9aQ62205 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn9aQ62205 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn9aQ62205 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn9aQ62205 Gm14460-201ENSMUST00000121511 639 ntBASIC15.12■□□□□ 0.01
Scn9aQ62205 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.12■□□□□ 0.01
Scn9aQ62205 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.12■□□□□ 0.01
Scn9aQ62205 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn9aQ62205 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn9aQ62205 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn9aQ62205 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scn9aQ62205 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Gm13315-201ENSMUST00000120376 991 ntBASIC15.11■□□□□ 0.01
Scn9aQ62205 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.11■□□□□ 0.01
Scn9aQ62205 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.11■□□□□ 0.01
Scn9aQ62205 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Scn9aQ62205 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.11■□□□□ 0.01
Scn9aQ62205 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn9aQ62205 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms