Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm25998-201ENSMUST00000175397 53 ntBASIC11.99□□□□□ -0.49
VcanQ62059 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.99□□□□□ -0.49
VcanQ62059 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.99□□□□□ -0.49
VcanQ62059 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.99□□□□□ -0.49
VcanQ62059 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.99□□□□□ -0.49
VcanQ62059 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.99□□□□□ -0.49
VcanQ62059 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.99□□□□□ -0.49
VcanQ62059 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.99□□□□□ -0.49
VcanQ62059 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Gm16071-201ENSMUST00000119589 793 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.99□□□□□ -0.49
VcanQ62059 Gm17826-201ENSMUST00000189720 798 ntBASIC11.99□□□□□ -0.49
VcanQ62059 Gm44980-201ENSMUST00000205826 314 ntBASIC11.99□□□□□ -0.49
VcanQ62059 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.99□□□□□ -0.49
VcanQ62059 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
VcanQ62059 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.98□□□□□ -0.49
VcanQ62059 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
VcanQ62059 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.98□□□□□ -0.49
VcanQ62059 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VcanQ62059 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.98□□□□□ -0.49
VcanQ62059 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gm14219-201ENSMUST00000120414 288 ntBASIC11.98□□□□□ -0.49
VcanQ62059 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.98□□□□□ -0.49
VcanQ62059 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gm23771-201ENSMUST00000178702 110 ntBASIC11.98□□□□□ -0.49
VcanQ62059 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.98□□□□□ -0.49
VcanQ62059 Gm7904-201ENSMUST00000217049 465 ntBASIC11.98□□□□□ -0.49
VcanQ62059 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
VcanQ62059 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.98□□□□□ -0.49
VcanQ62059 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.98□□□□□ -0.49
VcanQ62059 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VcanQ62059 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.97□□□□□ -0.49
VcanQ62059 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Gm12943-201ENSMUST00000119616 210 ntBASIC11.97□□□□□ -0.49
VcanQ62059 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.97□□□□□ -0.49
VcanQ62059 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.97□□□□□ -0.49
VcanQ62059 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.97□□□□□ -0.49
VcanQ62059 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms