Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.53□□□□□ -0.08
Ift88Q61371 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.53□□□□□ -0.08
Ift88Q61371 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.53□□□□□ -0.08
Ift88Q61371 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.53□□□□□ -0.08
Ift88Q61371 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ift88Q61371 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.53□□□□□ -0.08
Ift88Q61371 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.52□□□□□ -0.08
Ift88Q61371 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ift88Q61371 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ift88Q61371 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ift88Q61371 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ift88Q61371 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Ift88Q61371 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.52□□□□□ -0.08
Ift88Q61371 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.52□□□□□ -0.08
Ift88Q61371 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.52□□□□□ -0.08
Ift88Q61371 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.52□□□□□ -0.08
Ift88Q61371 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ift88Q61371 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ift88Q61371 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Gm27989-201ENSMUST00000184721 107 ntBASIC14.52□□□□□ -0.09
Ift88Q61371 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Gm9797-201ENSMUST00000052902 613 ntBASIC14.52□□□□□ -0.09
Ift88Q61371 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
Ift88Q61371 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ift88Q61371 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ift88Q61371 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ift88Q61371 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.51□□□□□ -0.09
Ift88Q61371 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ift88Q61371 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.51□□□□□ -0.09
Ift88Q61371 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.51□□□□□ -0.09
Ift88Q61371 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.51□□□□□ -0.09
Ift88Q61371 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Ift88Q61371 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.51□□□□□ -0.09
Ift88Q61371 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.51□□□□□ -0.09
Ift88Q61371 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.51□□□□□ -0.09
Ift88Q61371 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ift88Q61371 Gm29667-201ENSMUST00000190817 490 ntBASIC14.51□□□□□ -0.09
Ift88Q61371 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.51□□□□□ -0.09
Ift88Q61371 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ift88Q61371 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.51□□□□□ -0.09
Ift88Q61371 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.51□□□□□ -0.09
Ift88Q61371 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.51□□□□□ -0.09
Ift88Q61371 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.51□□□□□ -0.09
Ift88Q61371 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.51□□□□□ -0.09
Ift88Q61371 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ift88Q61371 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.51□□□□□ -0.09
Ift88Q61371 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ift88Q61371 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms