Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.33□□□□□ -0.12
Cln3Q61124 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cln3Q61124 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.33□□□□□ -0.12
Cln3Q61124 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cln3Q61124 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm14130-201ENSMUST00000118417 987 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 Gm4909-201ENSMUST00000118749 794 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 Gm13492-201ENSMUST00000119772 665 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm18212-201ENSMUST00000211678 889 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.32□□□□□ -0.12
Cln3Q61124 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm8712-201ENSMUST00000221090 701 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.32□□□□□ -0.12
Cln3Q61124 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cln3Q61124 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cln3Q61124 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cln3Q61124 Gm14277-201ENSMUST00000121195 360 ntBASIC14.31□□□□□ -0.12
Cln3Q61124 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Gm27046-201ENSMUST00000182160 463 ntBASIC14.31□□□□□ -0.12
Cln3Q61124 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.31□□□□□ -0.12
Cln3Q61124 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.31□□□□□ -0.12
Cln3Q61124 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cln3Q61124 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cln3Q61124 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cln3Q61124 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.3□□□□□ -0.12
Cln3Q61124 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cln3Q61124 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms