Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps54Q5SPW0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Gm26185-201ENSMUST00000157692 266 ntBASIC15.73■□□□□ 0.11
Vps54Q5SPW0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.73■□□□□ 0.11
Vps54Q5SPW0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps54Q5SPW0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Gm11637-201ENSMUST00000120601 592 ntBASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Gm43438-201ENSMUST00000198133 379 ntBASIC15.72■□□□□ 0.11
Vps54Q5SPW0 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps54Q5SPW0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm5187-201ENSMUST00000117317 991 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm12742-201ENSMUST00000117326 410 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm6222-202ENSMUST00000182143 629 ntBASIC15.71■□□□□ 0.11
Vps54Q5SPW0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms