Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav5d-4Q5R1F6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav5d-4Q5R1F6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Mir7654-201ENSMUST00000185082 70 ntBASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav5d-4Q5R1F6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav5d-4Q5R1F6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms