Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gm27628-201ENSMUST00000184911 107 ntBASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-3Q5R1C3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.84□□□□□ -0.84
Trav3-3Q5R1C3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Gm27741-201ENSMUST00000185060 237 ntBASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav3-3Q5R1C3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms