Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Gm6963-201ENSMUST00000147879 379 ntBASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Gm37666-201ENSMUST00000194110 866 ntBASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Gm8285-201ENSMUST00000208293 759 ntBASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.92■□□□□ 0.3
Mdc1Q5PSV9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Gm11930-201ENSMUST00000117788 190 ntBASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Gm44126-201ENSMUST00000204831 514 ntBASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Gm44545-201ENSMUST00000208262 746 ntBASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mdc1Q5PSV9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm11597-201ENSMUST00000121423 964 ntBASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm12208-201ENSMUST00000122004 163 ntBASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm12380-201ENSMUST00000119012 544 ntBASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mdc1Q5PSV9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mdc1Q5PSV9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms