Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ckap2Q3V1H1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gm7029-201ENSMUST00000173226 450 ntBASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gm26927-201ENSMUST00000182385 965 ntBASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gm37042-201ENSMUST00000193816 581 ntBASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.03■□□□□ -0
Ckap2Q3V1H1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.03■□□□□ -0
Ckap2Q3V1H1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ckap2Q3V1H1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap2Q3V1H1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Gm16177-201ENSMUST00000120728 718 ntBASIC15.02■□□□□ -0
Ckap2Q3V1H1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap2Q3V1H1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.02■□□□□ -0
Ckap2Q3V1H1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.02■□□□□ -0
Ckap2Q3V1H1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap2Q3V1H1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Snord83b-201ENSMUST00000104546 94 ntBASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Gm22121-201ENSMUST00000175148 54 ntBASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap2Q3V1H1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap2Q3V1H1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap2Q3V1H1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ckap2Q3V1H1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15□□□□□ -0.01
Ckap2Q3V1H1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap2Q3V1H1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms