Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm12783-201ENSMUST00000121425 397 ntBASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Spg11Q3UHA3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Gm45594-201ENSMUST00000211717 241 ntBASIC11.96□□□□□ -0.49
Spg11Q3UHA3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.96□□□□□ -0.49
Spg11Q3UHA3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Gm7851-201ENSMUST00000117574 323 ntBASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Gm26989-201ENSMUST00000182608 749 ntBASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Gm43520-201ENSMUST00000197996 164 ntBASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Trav11n-201ENSMUST00000200113 343 ntBASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Gm44980-201ENSMUST00000205826 314 ntBASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Spg11Q3UHA3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms