Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Gm13809-201ENSMUST00000117921 597 ntBASIC18.16■□□□□ 0.5
Trpm1Q2TV84 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Gm22144-201ENSMUST00000157402 102 ntBASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm1Q2TV84 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Mir1901-201ENSMUST00000122616 78 ntBASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Gm3671-201ENSMUST00000182463 1007 ntBASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trpm1Q2TV84 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.14■□□□□ 0.5
Trpm1Q2TV84 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Trpm1Q2TV84 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trpm1Q2TV84 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trpm1Q2TV84 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm13142-201ENSMUST00000117213 1453 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm6397-201ENSMUST00000161973 1069 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Mir7677-201ENSMUST00000184226 67 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm3332-201ENSMUST00000189337 928 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm43520-201ENSMUST00000197996 164 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm17831-201ENSMUST00000205579 900 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Gm7551-201ENSMUST00000089593 1074 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm1Q2TV84 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Gm16166-201ENSMUST00000118291 787 ntBASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Gm6905-201ENSMUST00000205729 511 ntBASIC18.13■□□□□ 0.49
Trpm1Q2TV84 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Gm45342-201ENSMUST00000210903 1363 ntBASIC18.13■□□□□ 0.49
Trpm1Q2TV84 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms