Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm5395-201ENSMUST00000121650 915 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm17192-201ENSMUST00000169031 511 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm27826-201ENSMUST00000175282 255 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm12623-201ENSMUST00000119849 1983 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 AC122350.1-201ENSMUST00000228135 533 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm14270-201ENSMUST00000118388 846 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm13117-201ENSMUST00000120894 691 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm2445-201ENSMUST00000182798 989 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ighv8-10-201ENSMUST00000199579 358 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm5847-201ENSMUST00000178959 1595 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gm12407-201ENSMUST00000180219 324 ntBASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm13263-201ENSMUST00000121271 838 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm16210-201ENSMUST00000122161 610 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm13827-201ENSMUST00000148801 372 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 AC166836.1-201ENSMUST00000219933 1795 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms