Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.53□□□□□ -0.56
Thbs3Q05895 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm11978-201ENSMUST00000122315 466 ntBASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.53□□□□□ -0.56
Thbs3Q05895 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.53□□□□□ -0.56
Thbs3Q05895 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs3Q05895 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs3Q05895 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.52□□□□□ -0.56
Thbs3Q05895 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Thbs3Q05895 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.52□□□□□ -0.56
Thbs3Q05895 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Thbs3Q05895 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.52□□□□□ -0.57
Thbs3Q05895 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm11618-201ENSMUST00000117946 267 ntBASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm11814-201ENSMUST00000119515 929 ntBASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm8598-201ENSMUST00000221184 836 ntBASIC11.52□□□□□ -0.57
Thbs3Q05895 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.52□□□□□ -0.57
Thbs3Q05895 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.52□□□□□ -0.57
Thbs3Q05895 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Thbs3Q05895 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Thbs3Q05895 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Thbs3Q05895 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.51□□□□□ -0.57
Thbs3Q05895 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Gm10156-201ENSMUST00000122364 462 ntBASIC11.51□□□□□ -0.57
Thbs3Q05895 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Proscos-202ENSMUST00000178990 666 ntBASIC11.51□□□□□ -0.57
Thbs3Q05895 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Thbs3Q05895 Gm27486-201ENSMUST00000184923 80 ntBASIC11.51□□□□□ -0.57
Thbs3Q05895 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.51□□□□□ -0.57
Thbs3Q05895 Gm6458-201ENSMUST00000211573 635 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms