Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Gm27486-201ENSMUST00000184923 80 ntBASIC12.12□□□□□ -0.47
Col10a1Q05306 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.12□□□□□ -0.47
Col10a1Q05306 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col10a1Q05306 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Col10a1Q05306 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Gm11814-201ENSMUST00000119515 929 ntBASIC12.11□□□□□ -0.47
Col10a1Q05306 Gm11803-201ENSMUST00000119966 444 ntBASIC12.11□□□□□ -0.47
Col10a1Q05306 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Proscos-202ENSMUST00000178990 666 ntBASIC12.11□□□□□ -0.47
Col10a1Q05306 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.11□□□□□ -0.47
Col10a1Q05306 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.11□□□□□ -0.47
Col10a1Q05306 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col10a1Q05306 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col10a1Q05306 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.1□□□□□ -0.47
Col10a1Q05306 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.1□□□□□ -0.47
Col10a1Q05306 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms