Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn6Q03958 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn6Q03958 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn6Q03958 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn6Q03958 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm7488-201ENSMUST00000117148 684 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm12341-201ENSMUST00000119724 503 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm5866-201ENSMUST00000177881 973 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Gm26315-201ENSMUST00000083890 321 ntBASIC13.21□□□□□ -0.29
Pfdn6Q03958 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pfdn6Q03958 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.21□□□□□ -0.3
Pfdn6Q03958 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn6Q03958 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Mir6392-201ENSMUST00000184924 108 ntBASIC13.2□□□□□ -0.3
Pfdn6Q03958 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfdn6Q03958 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Gm12859-201ENSMUST00000117834 427 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Gm15823-201ENSMUST00000064305 670 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.19□□□□□ -0.3
Pfdn6Q03958 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms