Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm25649-201ENSMUST00000178476 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm25548-201ENSMUST00000178681 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm23147-201ENSMUST00000178841 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm26095-201ENSMUST00000179270 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm22171-201ENSMUST00000179283 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm23936-201ENSMUST00000179354 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm22619-201ENSMUST00000179516 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm25255-201ENSMUST00000179579 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm24755-201ENSMUST00000179691 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm26506-201ENSMUST00000179692 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm25086-201ENSMUST00000179931 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm23243-201ENSMUST00000180047 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm24659-201ENSMUST00000180212 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm24169-201ENSMUST00000180244 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm23689-201ENSMUST00000180354 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm4804-201ENSMUST00000182234 999 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm27359-201ENSMUST00000184153 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm27785-201ENSMUST00000184268 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm27466-201ENSMUST00000184396 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 Gm27703-201ENSMUST00000184836 110 ntBASIC12.72□□□□□ -0.37
Msx2Q03358 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Msx2Q03358 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Msx2Q03358 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Msx2Q03358 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx2Q03358 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.71□□□□□ -0.37
Msx2Q03358 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Msx2Q03358 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msx2Q03358 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.71□□□□□ -0.37
Msx2Q03358 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.71□□□□□ -0.37
Msx2Q03358 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.71□□□□□ -0.37
Msx2Q03358 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Msx2Q03358 Gm8410-201ENSMUST00000117225 605 ntBASIC12.71□□□□□ -0.37
Msx2Q03358 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
Msx2Q03358 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Gm27533-201ENSMUST00000183800 152 ntBASIC12.71□□□□□ -0.37
Msx2Q03358 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.71□□□□□ -0.37
Msx2Q03358 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.71□□□□□ -0.37
Msx2Q03358 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.71□□□□□ -0.37
Msx2Q03358 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.71□□□□□ -0.37
Msx2Q03358 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msx2Q03358 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Msx2Q03358 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.71□□□□□ -0.37
Msx2Q03358 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.71□□□□□ -0.38
Msx2Q03358 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.71□□□□□ -0.38
Msx2Q03358 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Msx2Q03358 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.71□□□□□ -0.38
Msx2Q03358 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.71□□□□□ -0.38
Msx2Q03358 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Msx2Q03358 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx2Q03358 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Msx2Q03358 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Msx2Q03358 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
Msx2Q03358 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Msx2Q03358 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Msx2Q03358 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx2Q03358 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.7□□□□□ -0.38
Msx2Q03358 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Msx2Q03358 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms