Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm43184-201ENSMUST00000197247 542 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm12857-201ENSMUST00000117678 592 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm13668-201ENSMUST00000119237 1001 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm23045-201ENSMUST00000175041 96 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.18■□□□□ 0.18
Cacna1sQ02789 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1sQ02789 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.17■□□□□ 0.18
Cacna1sQ02789 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.17■□□□□ 0.18
Cacna1sQ02789 Gm2965-201ENSMUST00000198365 343 ntBASIC16.17■□□□□ 0.18
Cacna1sQ02789 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.17■□□□□ 0.18
Cacna1sQ02789 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.17■□□□□ 0.18
Cacna1sQ02789 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cacna1sQ02789 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm16071-201ENSMUST00000119589 793 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm17826-201ENSMUST00000189720 798 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm42518-201ENSMUST00000196277 938 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm44958-201ENSMUST00000203734 736 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 AC166341.2-201ENSMUST00000220571 120 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.16■□□□□ 0.18
Cacna1sQ02789 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.16■□□□□ 0.18
Cacna1sQ02789 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.15■□□□□ 0.18
Cacna1sQ02789 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cacna1sQ02789 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1sQ02789 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.15■□□□□ 0.18
Cacna1sQ02789 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cacna1sQ02789 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1sQ02789 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1sQ02789 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cacna1sQ02789 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms