Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcpQ01853 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
VcpQ01853 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VcpQ01853 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VcpQ01853 Gm13612-201ENSMUST00000119276 390 ntBASIC14.03□□□□□ -0.16
VcpQ01853 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Gm22331-201ENSMUST00000158066 136 ntBASIC14.03□□□□□ -0.16
VcpQ01853 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
VcpQ01853 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.03□□□□□ -0.16
VcpQ01853 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.03□□□□□ -0.16
VcpQ01853 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.03□□□□□ -0.16
VcpQ01853 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.03□□□□□ -0.16
VcpQ01853 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.03□□□□□ -0.16
VcpQ01853 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.03□□□□□ -0.16
VcpQ01853 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.03□□□□□ -0.16
VcpQ01853 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcpQ01853 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.02□□□□□ -0.16
VcpQ01853 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcpQ01853 Gm22018-201ENSMUST00000104357 131 ntBASIC14.02□□□□□ -0.17
VcpQ01853 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VcpQ01853 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.02□□□□□ -0.17
VcpQ01853 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.02□□□□□ -0.17
VcpQ01853 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.02□□□□□ -0.17
VcpQ01853 Gm43118-201ENSMUST00000199149 775 ntBASIC14.02□□□□□ -0.17
VcpQ01853 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.02□□□□□ -0.17
VcpQ01853 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VcpQ01853 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VcpQ01853 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.02□□□□□ -0.17
VcpQ01853 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VcpQ01853 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VcpQ01853 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcpQ01853 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.01□□□□□ -0.17
VcpQ01853 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Cts7-204ENSMUST00000225321 1257 ntBASIC14.01□□□□□ -0.17
VcpQ01853 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.01□□□□□ -0.17
VcpQ01853 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcpQ01853 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VcpQ01853 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms