Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.81□□□□□ -0.52
Shc1P98083 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.81□□□□□ -0.52
Shc1P98083 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Shc1P98083 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Gm44069-201ENSMUST00000204898 506 ntBASIC11.81□□□□□ -0.52
Shc1P98083 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.81□□□□□ -0.52
Shc1P98083 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.81□□□□□ -0.52
Shc1P98083 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shc1P98083 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shc1P98083 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Shc1P98083 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Shc1P98083 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shc1P98083 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Shc1P98083 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shc1P98083 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.8□□□□□ -0.52
Shc1P98083 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Gm16202-201ENSMUST00000117532 544 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Gm12390-201ENSMUST00000117897 397 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Gm12203-201ENSMUST00000118235 598 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Gm12209-201ENSMUST00000120089 596 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Gm27847-201ENSMUST00000183711 107 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Gm27375-201ENSMUST00000183799 107 ntBASIC11.8□□□□□ -0.52
Shc1P98083 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.8□□□□□ -0.52
Shc1P98083 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.8□□□□□ -0.52
Shc1P98083 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shc1P98083 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shc1P98083 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shc1P98083 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.79□□□□□ -0.52
Shc1P98083 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shc1P98083 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shc1P98083 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
Shc1P98083 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms