Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.22■□□□□ 0.51
Xrn1P97789 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Xrn1P97789 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Xrn1P97789 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.21■□□□□ 0.51
Xrn1P97789 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.21■□□□□ 0.51
Xrn1P97789 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Xrn1P97789 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC18.21■□□□□ 0.51
Xrn1P97789 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Xrn1P97789 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Xrn1P97789 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Xrn1P97789 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrn1P97789 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Xrn1P97789 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Xrn1P97789 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Gm25881-201ENSMUST00000157783 103 ntBASIC18.2■□□□□ 0.5
Xrn1P97789 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Xrn1P97789 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Xrn1P97789 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Gm43858-201ENSMUST00000199418 1778 ntBASIC18.2■□□□□ 0.5
Xrn1P97789 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 AC154262.2-201ENSMUST00000224310 2293 ntBASIC18.2■□□□□ 0.5
Xrn1P97789 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC18.2■□□□□ 0.5
Xrn1P97789 Gm7593-201ENSMUST00000187246 644 ntBASIC18.2■□□□□ 0.5
Xrn1P97789 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Xrn1P97789 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC18.2■□□□□ 0.5
Xrn1P97789 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Xrn1P97789 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrn1P97789 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.19■□□□□ 0.5
Xrn1P97789 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Gm22133-201ENSMUST00000102082 109 ntBASIC18.19■□□□□ 0.5
Xrn1P97789 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC18.19■□□□□ 0.5
Xrn1P97789 Gm28071-201ENSMUST00000190355 478 ntBASIC18.19■□□□□ 0.5
Xrn1P97789 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC18.19■□□□□ 0.5
Xrn1P97789 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC18.19■□□□□ 0.5
Xrn1P97789 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Xrn1P97789 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC18.19■□□□□ 0.5
Xrn1P97789 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC18.19■□□□□ 0.5
Xrn1P97789 Gm44401-201ENSMUST00000204462 2375 ntBASIC18.19■□□□□ 0.5
Xrn1P97789 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Xrn1P97789 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrn1P97789 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms