Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm24891-201ENSMUST00000104391 136 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 n-R5s84-201ENSMUST00000122591 109 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm9129-201ENSMUST00000218173 1689 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC8.65□□□□□ -1.02
PrkdcP97313 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC8.65□□□□□ -1.02
PrkdcP97313 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
PrkdcP97313 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm7722-201ENSMUST00000120646 741 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC8.65□□□□□ -1.02
PrkdcP97313 Gm5870-201ENSMUST00000196461 282 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC8.65□□□□□ -1.02
PrkdcP97313 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC8.65□□□□□ -1.02
PrkdcP97313 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
PrkdcP97313 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
PrkdcP97313 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
PrkdcP97313 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
PrkdcP97313 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
PrkdcP97313 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
PrkdcP97313 Gm13315-201ENSMUST00000120376 991 ntBASIC8.65□□□□□ -1.03
PrkdcP97313 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
PrkdcP97313 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
PrkdcP97313 AC151275.1-201ENSMUST00000224870 585 ntBASIC8.65□□□□□ -1.03
PrkdcP97313 AC165154.1-201ENSMUST00000226661 340 ntBASIC8.65□□□□□ -1.03
PrkdcP97313 Gm37736-201ENSMUST00000193564 2802 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm13916-201ENSMUST00000117368 628 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm9507-202ENSMUST00000180157 654 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm43854-201ENSMUST00000200418 394 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC8.64□□□□□ -1.03
PrkdcP97313 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC8.64□□□□□ -1.03
PrkdcP97313 AC124433.1-201ENSMUST00000224483 1063 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 AC134860.1-201ENSMUST00000224867 660 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm26448-201ENSMUST00000082446 203 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 n-R5s185-201ENSMUST00000083953 119 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm43056-201ENSMUST00000197865 2791 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm18626-201ENSMUST00000221512 1409 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
PrkdcP97313 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm11502-201ENSMUST00000120917 1211 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm12164-201ENSMUST00000121695 551 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm42629-201ENSMUST00000199063 1102 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Trav11n-201ENSMUST00000200113 343 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 AC122408.1-201ENSMUST00000218949 218 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Gm43721-201ENSMUST00000199677 2313 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
PrkdcP97313 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm17070-201ENSMUST00000170463 784 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 CT571245.2-201ENSMUST00000218421 305 ntBASIC8.64□□□□□ -1.03
PrkdcP97313 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
PrkdcP97313 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
PrkdcP97313 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms