Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Gm11793-201ENSMUST00000120433 981 ntBASIC14.2□□□□□ -0.14
CiitaP79621 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.2□□□□□ -0.14
CiitaP79621 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CiitaP79621 Gm3890-201ENSMUST00000182416 207 ntBASIC14.2□□□□□ -0.14
CiitaP79621 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Gm38158-201ENSMUST00000194617 339 ntBASIC14.2□□□□□ -0.14
CiitaP79621 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.2□□□□□ -0.14
CiitaP79621 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CiitaP79621 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.2□□□□□ -0.14
CiitaP79621 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CiitaP79621 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CiitaP79621 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CiitaP79621 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.19□□□□□ -0.14
CiitaP79621 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.19□□□□□ -0.14
CiitaP79621 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.19□□□□□ -0.14
CiitaP79621 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CiitaP79621 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.19□□□□□ -0.14
CiitaP79621 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CiitaP79621 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.19□□□□□ -0.14
CiitaP79621 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CiitaP79621 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.19□□□□□ -0.14
CiitaP79621 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CiitaP79621 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.18□□□□□ -0.14
CiitaP79621 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CiitaP79621 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CiitaP79621 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.18□□□□□ -0.14
CiitaP79621 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.18□□□□□ -0.14
CiitaP79621 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.18□□□□□ -0.14
CiitaP79621 Gm27501-201ENSMUST00000183599 107 ntBASIC14.18□□□□□ -0.14
CiitaP79621 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.18□□□□□ -0.14
CiitaP79621 Gm45930-201ENSMUST00000221330 292 ntBASIC14.18□□□□□ -0.14
CiitaP79621 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.18□□□□□ -0.14
CiitaP79621 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CiitaP79621 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CiitaP79621 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CiitaP79621 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CiitaP79621 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CiitaP79621 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.17□□□□□ -0.14
CiitaP79621 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CiitaP79621 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CiitaP79621 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.17□□□□□ -0.14
CiitaP79621 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms