Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PrkcbP68404 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PrkcbP68404 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.17□□□□□ -0.14
PrkcbP68404 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.17□□□□□ -0.14
PrkcbP68404 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.17□□□□□ -0.14
PrkcbP68404 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.17□□□□□ -0.14
PrkcbP68404 Gm37008-201ENSMUST00000195712 319 ntBASIC14.17□□□□□ -0.14
PrkcbP68404 Gm42693-201ENSMUST00000196779 631 ntBASIC14.17□□□□□ -0.14
PrkcbP68404 Gm19184-201ENSMUST00000196798 928 ntBASIC14.17□□□□□ -0.14
PrkcbP68404 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PrkcbP68404 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PrkcbP68404 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PrkcbP68404 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PrkcbP68404 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PrkcbP68404 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PrkcbP68404 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PrkcbP68404 Gm22018-201ENSMUST00000104357 131 ntBASIC14.16□□□□□ -0.14
PrkcbP68404 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PrkcbP68404 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Gm17208-201ENSMUST00000168388 535 ntBASIC14.16□□□□□ -0.14
PrkcbP68404 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.16□□□□□ -0.14
PrkcbP68404 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PrkcbP68404 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.16□□□□□ -0.14
PrkcbP68404 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Gm4768-201ENSMUST00000206199 686 ntBASIC14.16□□□□□ -0.14
PrkcbP68404 Gm45880-201ENSMUST00000213041 853 ntBASIC14.16□□□□□ -0.14
PrkcbP68404 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PrkcbP68404 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PrkcbP68404 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PrkcbP68404 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PrkcbP68404 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.15□□□□□ -0.14
PrkcbP68404 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PrkcbP68404 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PrkcbP68404 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PrkcbP68404 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkcbP68404 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms