Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Usp46P62069 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.84□□□□□ -0.19
Usp46P62069 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Gm12384-201ENSMUST00000119228 919 ntBASIC13.84□□□□□ -0.19
Usp46P62069 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Gm4271-201ENSMUST00000174444 973 ntBASIC13.84□□□□□ -0.19
Usp46P62069 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.84□□□□□ -0.19
Usp46P62069 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Usp46P62069 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp46P62069 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp46P62069 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp46P62069 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.84□□□□□ -0.19
Usp46P62069 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp46P62069 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Usp46P62069 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Usp46P62069 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp46P62069 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp46P62069 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp46P62069 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Gm13392-201ENSMUST00000117708 150 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Gm11618-201ENSMUST00000117946 267 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Gm14776-201ENSMUST00000121029 887 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp46P62069 Gm37497-201ENSMUST00000195830 798 ntBASIC13.83□□□□□ -0.2
Usp46P62069 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Gm17917-201ENSMUST00000218561 953 ntBASIC13.83□□□□□ -0.2
Usp46P62069 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp46P62069 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp46P62069 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.82□□□□□ -0.2
Usp46P62069 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp46P62069 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp46P62069 Gm13123-201ENSMUST00000122173 492 ntBASIC13.82□□□□□ -0.2
Usp46P62069 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms