Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Lmo4P61969 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lmo4P61969 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.57□□□□□ -0.72
Lmo4P61969 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Lmo4P61969 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
Lmo4P61969 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.57□□□□□ -0.72
Lmo4P61969 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lmo4P61969 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.57□□□□□ -0.72
Lmo4P61969 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm14726-201ENSMUST00000120623 896 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm23363-201ENSMUST00000175024 79 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Gm38092-201ENSMUST00000195600 653 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Gm5904-201ENSMUST00000210286 865 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm6082-201ENSMUST00000215204 454 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Lmo4P61969 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.56□□□□□ -0.72
Lmo4P61969 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.56□□□□□ -0.72
Lmo4P61969 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Lmo4P61969 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Lmo4P61969 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.55□□□□□ -0.72
Lmo4P61969 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lmo4P61969 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.55□□□□□ -0.72
Lmo4P61969 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lmo4P61969 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.55□□□□□ -0.72
Lmo4P61969 Gm12291-201ENSMUST00000121627 311 ntBASIC10.55□□□□□ -0.72
Lmo4P61969 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.55□□□□□ -0.72
Lmo4P61969 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lmo4P61969 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.55□□□□□ -0.72
Lmo4P61969 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.55□□□□□ -0.72
Lmo4P61969 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms