Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Daam2-202ENSMUST00000224595 1926 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.66□□□□□ -0.54
Sf3b6P59708 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm15240-201ENSMUST00000118156 720 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm15653-201ENSMUST00000119247 907 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm28630-201ENSMUST00000187806 498 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm9229-201ENSMUST00000222777 126 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.66□□□□□ -0.54
Sf3b6P59708 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Rubie-203ENSMUST00000227803 2430 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.66□□□□□ -0.54
Sf3b6P59708 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sf3b6P59708 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm13453-201ENSMUST00000118708 357 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm15393-201ENSMUST00000120499 219 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm14767-201ENSMUST00000121559 586 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Auts2-212ENSMUST00000178555 309 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm27618-201ENSMUST00000183671 60 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Mir7023-201ENSMUST00000185093 64 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm2594-201ENSMUST00000214774 742 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Shd-206ENSMUST00000225145 998 ntBASIC11.65□□□□□ -0.54
Sf3b6P59708 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.65□□□□□ -0.54
Sf3b6P59708 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sf3b6P59708 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sf3b6P59708 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.65□□□□□ -0.55
Sf3b6P59708 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sf3b6P59708 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sf3b6P59708 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sf3b6P59708 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.65□□□□□ -0.55
Sf3b6P59708 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sf3b6P59708 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sf3b6P59708 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.64□□□□□ -0.55
Sf3b6P59708 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.64□□□□□ -0.55
Sf3b6P59708 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.64□□□□□ -0.55
Sf3b6P59708 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sf3b6P59708 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms