Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup43P59235 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup43P59235 Gm18041-201ENSMUST00000218210 618 ntBASIC12.4□□□□□ -0.42
Nup43P59235 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.4□□□□□ -0.42
Nup43P59235 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.4□□□□□ -0.42
Nup43P59235 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Nup43P59235 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup43P59235 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nup43P59235 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup43P59235 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup43P59235 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Nup43P59235 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nup43P59235 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Nup43P59235 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup43P59235 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nup43P59235 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Nup43P59235 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Gm22331-201ENSMUST00000158066 136 ntBASIC12.39□□□□□ -0.43
Nup43P59235 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.39□□□□□ -0.43
Nup43P59235 Gm6458-201ENSMUST00000211573 635 ntBASIC12.39□□□□□ -0.43
Nup43P59235 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup43P59235 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.39□□□□□ -0.43
Nup43P59235 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nup43P59235 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.39□□□□□ -0.43
Nup43P59235 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.39□□□□□ -0.43
Nup43P59235 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup43P59235 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.38□□□□□ -0.43
Nup43P59235 Gm12203-201ENSMUST00000118235 598 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Gm12209-201ENSMUST00000120089 596 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Gm11978-201ENSMUST00000122315 466 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Gm24644-201ENSMUST00000157114 139 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Gm29649-201ENSMUST00000185649 419 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Gm7561-201ENSMUST00000211203 886 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Gm6091-201ENSMUST00000098307 165 ntBASIC12.38□□□□□ -0.43
Nup43P59235 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nup43P59235 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup43P59235 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup43P59235 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms