Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.18□□□□□ -0.3
SmoP56726 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.18□□□□□ -0.3
SmoP56726 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.18□□□□□ -0.3
SmoP56726 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SmoP56726 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.18□□□□□ -0.3
SmoP56726 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.18□□□□□ -0.3
SmoP56726 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Gm17208-201ENSMUST00000168388 535 ntBASIC13.18□□□□□ -0.3
SmoP56726 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Gm42693-201ENSMUST00000196779 631 ntBASIC13.18□□□□□ -0.3
SmoP56726 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.18□□□□□ -0.3
SmoP56726 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.18□□□□□ -0.3
SmoP56726 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SmoP56726 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SmoP56726 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SmoP56726 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SmoP56726 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.18□□□□□ -0.3
SmoP56726 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SmoP56726 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SmoP56726 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.17□□□□□ -0.3
SmoP56726 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SmoP56726 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Gm6222-202ENSMUST00000182143 629 ntBASIC13.17□□□□□ -0.3
SmoP56726 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.17□□□□□ -0.3
SmoP56726 Gm37008-201ENSMUST00000195712 319 ntBASIC13.17□□□□□ -0.3
SmoP56726 Gm19184-201ENSMUST00000196798 928 ntBASIC13.17□□□□□ -0.3
SmoP56726 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.17□□□□□ -0.3
SmoP56726 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.17□□□□□ -0.3
SmoP56726 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SmoP56726 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.17□□□□□ -0.3
SmoP56726 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SmoP56726 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SmoP56726 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SmoP56726 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.16□□□□□ -0.3
SmoP56726 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.16□□□□□ -0.3
SmoP56726 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SmoP56726 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
SmoP56726 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Gm11591-201ENSMUST00000120063 702 ntBASIC13.16□□□□□ -0.3
SmoP56726 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
SmoP56726 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.16□□□□□ -0.3
SmoP56726 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.16□□□□□ -0.3
SmoP56726 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SmoP56726 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.16□□□□□ -0.3
SmoP56726 Gm18054-201ENSMUST00000207539 555 ntBASIC13.16□□□□□ -0.3
SmoP56726 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SmoP56726 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.16□□□□□ -0.3
SmoP56726 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.16□□□□□ -0.3
SmoP56726 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
SmoP56726 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.16□□□□□ -0.3
SmoP56726 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SmoP56726 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SmoP56726 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.15□□□□□ -0.3
SmoP56726 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SmoP56726 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.15□□□□□ -0.3
SmoP56726 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.15□□□□□ -0.3
SmoP56726 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SmoP56726 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SmoP56726 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SmoP56726 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SmoP56726 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms