Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.97□□□□□ -0.17
NrlP54846 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.97□□□□□ -0.17
NrlP54846 Gm4986-201ENSMUST00000119731 549 ntBASIC13.97□□□□□ -0.17
NrlP54846 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.97□□□□□ -0.17
NrlP54846 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.97□□□□□ -0.17
NrlP54846 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.97□□□□□ -0.17
NrlP54846 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.97□□□□□ -0.17
NrlP54846 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NrlP54846 Mospd4-201ENSMUST00000180618 576 ntBASIC13.97□□□□□ -0.17
NrlP54846 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Gm19163-201ENSMUST00000223313 780 ntBASIC13.97□□□□□ -0.17
NrlP54846 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NrlP54846 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NrlP54846 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.97□□□□□ -0.17
NrlP54846 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.96□□□□□ -0.17
NrlP54846 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NrlP54846 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Gm4768-201ENSMUST00000206199 686 ntBASIC13.96□□□□□ -0.17
NrlP54846 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NrlP54846 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NrlP54846 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NrlP54846 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
NrlP54846 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
NrlP54846 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NrlP54846 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NrlP54846 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NrlP54846 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NrlP54846 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NrlP54846 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.96□□□□□ -0.18
NrlP54846 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NrlP54846 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.95□□□□□ -0.18
NrlP54846 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NrlP54846 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm26185-201ENSMUST00000157692 266 ntBASIC13.95□□□□□ -0.18
NrlP54846 Gm3890-201ENSMUST00000182416 207 ntBASIC13.95□□□□□ -0.18
NrlP54846 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.95□□□□□ -0.18
NrlP54846 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.95□□□□□ -0.18
NrlP54846 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NrlP54846 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms