Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.13□□□□□ -0.31
Fdft1P53798 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Fdft1P53798 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.13□□□□□ -0.31
Fdft1P53798 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fdft1P53798 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fdft1P53798 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Paupar-201ENSMUST00000194826 3482 ntBASIC13.12□□□□□ -0.31
Fdft1P53798 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.12□□□□□ -0.31
Fdft1P53798 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.12□□□□□ -0.31
Fdft1P53798 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.12□□□□□ -0.31
Fdft1P53798 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.12□□□□□ -0.31
Fdft1P53798 Gm42550-201ENSMUST00000201553 960 ntBASIC13.12□□□□□ -0.31
Fdft1P53798 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Fdft1P53798 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.12□□□□□ -0.31
Fdft1P53798 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Fdft1P53798 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.12□□□□□ -0.31
Fdft1P53798 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Fdft1P53798 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Fdft1P53798 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.12□□□□□ -0.31
Fdft1P53798 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Fdft1P53798 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fdft1P53798 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Fdft1P53798 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.11□□□□□ -0.31
Fdft1P53798 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.11□□□□□ -0.31
Fdft1P53798 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.11□□□□□ -0.31
Fdft1P53798 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.11□□□□□ -0.31
Fdft1P53798 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Fdft1P53798 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Fdft1P53798 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Fdft1P53798 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Fdft1P53798 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Fdft1P53798 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fdft1P53798 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms