Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox3P53784 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.6□□□□□ -0.39
Sox3P53784 Gm15371-201ENSMUST00000117057 784 ntBASIC12.6□□□□□ -0.39
Sox3P53784 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox3P53784 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox3P53784 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox3P53784 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox3P53784 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 Gm9368-201ENSMUST00000219348 831 ntBASIC12.6□□□□□ -0.39
Sox3P53784 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox3P53784 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox3P53784 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox3P53784 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sox3P53784 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox3P53784 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sox3P53784 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Gm15957-201ENSMUST00000118893 974 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Gm12997-201ENSMUST00000120207 640 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Gm11793-201ENSMUST00000120433 981 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox3P53784 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox3P53784 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox3P53784 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Sox3P53784 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox3P53784 Gm43138-201ENSMUST00000199123 708 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Gm29705-201ENSMUST00000212598 474 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Gm8598-201ENSMUST00000221184 836 ntBASIC12.59□□□□□ -0.39
Sox3P53784 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.59□□□□□ -0.39
Sox3P53784 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox3P53784 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Sox3P53784 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox3P53784 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox3P53784 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.58□□□□□ -0.4
Sox3P53784 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.58□□□□□ -0.4
Sox3P53784 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Sox3P53784 Gm1335-201ENSMUST00000121653 386 ntBASIC12.58□□□□□ -0.4
Sox3P53784 Gm12882-201ENSMUST00000121696 517 ntBASIC12.58□□□□□ -0.4
Sox3P53784 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Sox3P53784 Gm8810-201ENSMUST00000172895 754 ntBASIC12.58□□□□□ -0.4
Sox3P53784 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Gm27341-201ENSMUST00000183570 106 ntBASIC12.58□□□□□ -0.4
Sox3P53784 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox3P53784 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox3P53784 Gm18473-201ENSMUST00000220543 868 ntBASIC12.58□□□□□ -0.4
Sox3P53784 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox3P53784 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox3P53784 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms