Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.87□□□□□ -0.51
Rfx3P48381 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.87□□□□□ -0.51
Rfx3P48381 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.87□□□□□ -0.51
Rfx3P48381 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.87□□□□□ -0.51
Rfx3P48381 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.87□□□□□ -0.51
Rfx3P48381 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Rfx3P48381 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.87□□□□□ -0.51
Rfx3P48381 Gm5279-201ENSMUST00000199575 745 ntBASIC11.87□□□□□ -0.51
Rfx3P48381 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.87□□□□□ -0.51
Rfx3P48381 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.87□□□□□ -0.51
Rfx3P48381 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rfx3P48381 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rfx3P48381 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.87□□□□□ -0.51
Rfx3P48381 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Rubie-203ENSMUST00000227803 2430 ntBASIC11.86□□□□□ -0.51
Rfx3P48381 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rfx3P48381 Mir874-201ENSMUST00000104769 76 ntBASIC11.86□□□□□ -0.51
Rfx3P48381 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Gm12485-201ENSMUST00000119641 291 ntBASIC11.86□□□□□ -0.51
Rfx3P48381 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.86□□□□□ -0.51
Rfx3P48381 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Rfx3P48381 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Gm28760-201ENSMUST00000185995 736 ntBASIC11.86□□□□□ -0.51
Rfx3P48381 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.86□□□□□ -0.51
Rfx3P48381 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rfx3P48381 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfx3P48381 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfx3P48381 Syt7-204ENSMUST00000223586 1344 ntBASIC11.86□□□□□ -0.51
Rfx3P48381 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.85□□□□□ -0.51
Rfx3P48381 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rfx3P48381 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.85□□□□□ -0.51
Rfx3P48381 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.85□□□□□ -0.51
Rfx3P48381 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rfx3P48381 Gm43094-201ENSMUST00000196549 921 ntBASIC11.85□□□□□ -0.51
Rfx3P48381 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rfx3P48381 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rfx3P48381 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.85□□□□□ -0.51
Rfx3P48381 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms