Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox18P43680 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sox18P43680 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Gm11331-201ENSMUST00000119764 288 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox18P43680 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Gm40332-201ENSMUST00000199847 938 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.67□□□□□ -0.38
Sox18P43680 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox18P43680 Gm30285-201ENSMUST00000214614 422 ntBASIC12.67□□□□□ -0.38
Sox18P43680 CT009713.1-201ENSMUST00000224828 853 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.67□□□□□ -0.38
Sox18P43680 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox18P43680 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Gm14350-201ENSMUST00000116642 640 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12616-201ENSMUST00000118594 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm15171-201ENSMUST00000122191 334 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Sox18P43680 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Gm22923-201ENSMUST00000174952 110 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12624-201ENSMUST00000177615 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12621-201ENSMUST00000177760 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12615-201ENSMUST00000177970 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12622-201ENSMUST00000177975 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12627-201ENSMUST00000178412 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12625-201ENSMUST00000179122 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12614-201ENSMUST00000179586 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm12613-201ENSMUST00000180323 382 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Gm43222-201ENSMUST00000199013 603 ntBASIC12.66□□□□□ -0.38
Sox18P43680 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.66□□□□□ -0.38
Sox18P43680 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.66□□□□□ -0.38
Sox18P43680 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.66□□□□□ -0.38
Sox18P43680 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox18P43680 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox18P43680 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox18P43680 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox18P43680 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.65□□□□□ -0.38
Sox18P43680 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms