Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Chd1P40201 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC19.22■□□□□ 0.67
Chd1P40201 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC19.22■□□□□ 0.67
Chd1P40201 Gm12030-201ENSMUST00000121917 223 ntBASIC19.22■□□□□ 0.67
Chd1P40201 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Gm29410-201ENSMUST00000188383 694 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC19.22■□□□□ 0.67
Chd1P40201 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC19.22■□□□□ 0.67
Chd1P40201 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC19.22■□□□□ 0.67
Chd1P40201 Gm18463-201ENSMUST00000207258 474 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Gm18460-201ENSMUST00000208088 464 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Gm9797-202ENSMUST00000218003 294 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Chd1P40201 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 AC159649.2-201ENSMUST00000222984 3223 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Chd1P40201 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC19.22■□□□□ 0.67
Chd1P40201 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Gm12407-201ENSMUST00000180219 324 ntBASIC19.22■□□□□ 0.67
Chd1P40201 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Gm18706-201ENSMUST00000210053 1066 ntBASIC19.22■□□□□ 0.67
Chd1P40201 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chd1P40201 AC124433.1-201ENSMUST00000224483 1063 ntBASIC19.22■□□□□ 0.67
Chd1P40201 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1P40201 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC19.21■□□□□ 0.67
Chd1P40201 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Chd1P40201 Gm12856-201ENSMUST00000119471 1293 ntBASIC19.21■□□□□ 0.67
Chd1P40201 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC19.21■□□□□ 0.67
Chd1P40201 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 n-R5s211-201ENSMUST00000093689 119 ntBASIC19.21■□□□□ 0.67
Chd1P40201 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Chd1P40201 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1P40201 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chd1P40201 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
Chd1P40201 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chd1P40201 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.2■□□□□ 0.66
Chd1P40201 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chd1P40201 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.2■□□□□ 0.66
Chd1P40201 Gm11470-201ENSMUST00000118868 1475 ntBASIC19.2■□□□□ 0.66
Chd1P40201 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Gm12218-201ENSMUST00000117666 399 ntBASIC19.2■□□□□ 0.66
Chd1P40201 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC19.2■□□□□ 0.66
Chd1P40201 Gm15566-201ENSMUST00000121130 590 ntBASIC19.2■□□□□ 0.66
Chd1P40201 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC19.2■□□□□ 0.66
Chd1P40201 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Ighv5-11-201ENSMUST00000193354 371 ntBASIC19.2■□□□□ 0.66
Chd1P40201 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC19.2■□□□□ 0.66
Chd1P40201 Gm45575-201ENSMUST00000210283 548 ntBASIC19.2■□□□□ 0.66
Chd1P40201 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC19.2■□□□□ 0.66
Chd1P40201 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1P40201 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chd1P40201 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chd1P40201 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Chd1P40201 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms