Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.51□□□□□ -0.57
Upk2P38575 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Upk2P38575 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Upk2P38575 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Gm14928-201ENSMUST00000120198 477 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Upk2P38575 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.51□□□□□ -0.57
Upk2P38575 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.51□□□□□ -0.57
Upk2P38575 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.51□□□□□ -0.57
Upk2P38575 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.51□□□□□ -0.57
Upk2P38575 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Gm6180-201ENSMUST00000065243 498 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.51□□□□□ -0.57
Upk2P38575 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk2P38575 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Upk2P38575 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.5□□□□□ -0.57
Upk2P38575 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.5□□□□□ -0.57
Upk2P38575 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Upk2P38575 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.5□□□□□ -0.57
Upk2P38575 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk2P38575 Gm23984-201ENSMUST00000157139 203 ntBASIC11.5□□□□□ -0.57
Upk2P38575 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.5□□□□□ -0.57
Upk2P38575 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk2P38575 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Upk2P38575 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.5□□□□□ -0.57
Upk2P38575 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Upk2P38575 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Upk2P38575 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk2P38575 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk2P38575 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Upk2P38575 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk2P38575 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk2P38575 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Gm13612-201ENSMUST00000119276 390 ntBASIC11.49□□□□□ -0.57
Upk2P38575 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Upk2P38575 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk2P38575 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk2P38575 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.49□□□□□ -0.57
Upk2P38575 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.49□□□□□ -0.57
Upk2P38575 Gm38671-201ENSMUST00000200573 130 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms