Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.55□□□□□ -0.56
Cd28P31041 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cd28P31041 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Cd28P31041 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Gm8410-201ENSMUST00000117225 605 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.54□□□□□ -0.56
Cd28P31041 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Cd28P31041 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.54□□□□□ -0.56
Cd28P31041 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cd28P31041 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Gm18206-201ENSMUST00000207027 926 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cd28P31041 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.54□□□□□ -0.56
Cd28P31041 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cd28P31041 Gm46209-201ENSMUST00000217912 553 ntBASIC11.54□□□□□ -0.56
Cd28P31041 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cd28P31041 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.53□□□□□ -0.56
Cd28P31041 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cd28P31041 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cd28P31041 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.53□□□□□ -0.56
Cd28P31041 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.53□□□□□ -0.56
Cd28P31041 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.53□□□□□ -0.56
Cd28P31041 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Cd28P31041 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.53□□□□□ -0.56
Cd28P31041 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.53□□□□□ -0.56
Cd28P31041 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cd28P31041 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cd28P31041 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.53□□□□□ -0.56
Cd28P31041 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cd28P31041 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd28P31041 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cd28P31041 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cd28P31041 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cd28P31041 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms