Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.91□□□□□ -0.5
VtnP29788 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.91□□□□□ -0.5
VtnP29788 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VtnP29788 Gm27731-201ENSMUST00000185192 107 ntBASIC11.91□□□□□ -0.5
VtnP29788 Gm29127-201ENSMUST00000188304 517 ntBASIC11.91□□□□□ -0.5
VtnP29788 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.91□□□□□ -0.5
VtnP29788 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.91□□□□□ -0.5
VtnP29788 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.91□□□□□ -0.5
VtnP29788 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
VtnP29788 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.91□□□□□ -0.5
VtnP29788 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.91□□□□□ -0.5
VtnP29788 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VtnP29788 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.91□□□□□ -0.5
VtnP29788 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
VtnP29788 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VtnP29788 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Gm14350-201ENSMUST00000116642 640 ntBASIC11.9□□□□□ -0.5
VtnP29788 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Gm8062-201ENSMUST00000139696 444 ntBASIC11.9□□□□□ -0.5
VtnP29788 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.9□□□□□ -0.5
VtnP29788 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.9□□□□□ -0.5
VtnP29788 Gm37424-201ENSMUST00000191727 561 ntBASIC11.9□□□□□ -0.5
VtnP29788 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.9□□□□□ -0.5
VtnP29788 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.9□□□□□ -0.5
VtnP29788 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
VtnP29788 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.9□□□□□ -0.5
VtnP29788 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.9□□□□□ -0.5
VtnP29788 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
VtnP29788 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
VtnP29788 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VtnP29788 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.9□□□□□ -0.5
VtnP29788 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VtnP29788 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VtnP29788 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VtnP29788 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VtnP29788 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
VtnP29788 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VtnP29788 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
VtnP29788 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VtnP29788 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
VtnP29788 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.89□□□□□ -0.51
VtnP29788 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
VtnP29788 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VtnP29788 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
VtnP29788 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.89□□□□□ -0.51
VtnP29788 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Gm24196-201ENSMUST00000179161 110 ntBASIC11.89□□□□□ -0.51
VtnP29788 Mir7221-201ENSMUST00000184009 72 ntBASIC11.89□□□□□ -0.51
VtnP29788 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.89□□□□□ -0.51
VtnP29788 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.89□□□□□ -0.51
VtnP29788 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VtnP29788 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms