Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm12390-201ENSMUST00000117897 397 ntBASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Gm6458-201ENSMUST00000211573 635 ntBASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1bP25119 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm13369-201ENSMUST00000119442 987 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm37922-201ENSMUST00000195596 455 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm43433-201ENSMUST00000196573 481 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm19931-201ENSMUST00000198920 368 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1bP25119 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfrsf1bP25119 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.15□□□□□ -0.47
Tnfrsf1bP25119 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Tnfrsf1bP25119 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfrsf1bP25119 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf1bP25119 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms