Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prim1P20664 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prim1P20664 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prim1P20664 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prim1P20664 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.74■□□□□ 0.27
Prim1P20664 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.74■□□□□ 0.27
Prim1P20664 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.74■□□□□ 0.27
Prim1P20664 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Prim1P20664 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.74■□□□□ 0.27
Prim1P20664 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC16.74■□□□□ 0.27
Prim1P20664 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.74■□□□□ 0.27
Prim1P20664 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.74■□□□□ 0.27
Prim1P20664 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.74■□□□□ 0.27
Prim1P20664 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Gm14667-201ENSMUST00000119448 1350 ntBASIC16.74■□□□□ 0.27
Prim1P20664 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.74■□□□□ 0.27
Prim1P20664 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prim1P20664 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Prim1P20664 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Prim1P20664 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.73■□□□□ 0.27
Prim1P20664 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Gm8312-201ENSMUST00000119380 618 ntBASIC16.73■□□□□ 0.27
Prim1P20664 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.73■□□□□ 0.27
Prim1P20664 Gm7584-201ENSMUST00000175829 940 ntBASIC16.73■□□□□ 0.27
Prim1P20664 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Gm29396-201ENSMUST00000185659 716 ntBASIC16.73■□□□□ 0.27
Prim1P20664 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.73■□□□□ 0.27
Prim1P20664 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.73■□□□□ 0.27
Prim1P20664 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.73■□□□□ 0.27
Prim1P20664 Cts7-204ENSMUST00000225321 1257 ntBASIC16.73■□□□□ 0.27
Prim1P20664 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Prim1P20664 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Prim1P20664 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prim1P20664 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.72■□□□□ 0.27
Prim1P20664 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prim1P20664 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prim1P20664 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.72■□□□□ 0.27
Prim1P20664 Gm22121-201ENSMUST00000175148 54 ntBASIC16.72■□□□□ 0.27
Prim1P20664 Gm9723-201ENSMUST00000192100 457 ntBASIC16.72■□□□□ 0.27
Prim1P20664 Gm43758-201ENSMUST00000199500 367 ntBASIC16.72■□□□□ 0.27
Prim1P20664 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.72■□□□□ 0.27
Prim1P20664 Gm45865-201ENSMUST00000211815 945 ntBASIC16.72■□□□□ 0.27
Prim1P20664 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.72■□□□□ 0.27
Prim1P20664 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Prim1P20664 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prim1P20664 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Prim1P20664 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.72■□□□□ 0.27
Prim1P20664 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Prim1P20664 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prim1P20664 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prim1P20664 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prim1P20664 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms