Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm12928-201ENSMUST00000117115 573 ntBASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm11814-201ENSMUST00000119515 929 ntBASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm27243-201ENSMUST00000183964 521 ntBASIC10.88□□□□□ -0.67
Tnfrsf9P20334 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Gm8463-201ENSMUST00000208573 613 ntBASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfrsf9P20334 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Gm29649-201ENSMUST00000185649 419 ntBASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Gm40466-201ENSMUST00000212174 422 ntBASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfrsf9P20334 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.86□□□□□ -0.67
Tnfrsf9P20334 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms