Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Kcna1P16388 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Kcna1P16388 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Kcna1P16388 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Kcna1P16388 Gm8062-201ENSMUST00000139696 444 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Gm6222-202ENSMUST00000182143 629 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Gm43438-201ENSMUST00000198133 379 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Gm19931-201ENSMUST00000198920 368 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.88□□□□□ -0.03
Kcna1P16388 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Kcna1P16388 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.88□□□□□ -0.03
Kcna1P16388 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Kcna1P16388 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.88□□□□□ -0.03
Kcna1P16388 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Kcna1P16388 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Kcna1P16388 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Kcna1P16388 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Kcna1P16388 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Kcna1P16388 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Kcna1P16388 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Kcna1P16388 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Gm22018-201ENSMUST00000104357 131 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 Mir874-201ENSMUST00000104769 76 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.87□□□□□ -0.03
Kcna1P16388 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.87□□□□□ -0.03
Kcna1P16388 Gm11637-201ENSMUST00000120601 592 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.87□□□□□ -0.03
Kcna1P16388 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.87□□□□□ -0.03
Kcna1P16388 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.87□□□□□ -0.03
Kcna1P16388 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.87□□□□□ -0.03
Kcna1P16388 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Snora73a-201ENSMUST00000082453 205 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.87□□□□□ -0.03
Kcna1P16388 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Kcna1P16388 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Kcna1P16388 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Kcna1P16388 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.87□□□□□ -0.03
Kcna1P16388 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Kcna1P16388 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Kcna1P16388 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Kcna1P16388 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.86□□□□□ -0.03
Kcna1P16388 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.86□□□□□ -0.03
Kcna1P16388 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.86□□□□□ -0.03
Kcna1P16388 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.86□□□□□ -0.03
Kcna1P16388 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Snord83b-201ENSMUST00000104546 94 ntBASIC14.86□□□□□ -0.03
Kcna1P16388 Gm13392-201ENSMUST00000117708 150 ntBASIC14.86□□□□□ -0.03
Kcna1P16388 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Kcna1P16388 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms