Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Gm25857-201ENSMUST00000082788 129 ntBASIC11.06□□□□□ -0.64
Ly6c1P0CW02 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ly6c1P0CW02 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm16202-201ENSMUST00000117532 544 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm27331-201ENSMUST00000183705 60 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Prl7a1-203ENSMUST00000224852 1283 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ly6c1P0CW02 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Gm11618-201ENSMUST00000117946 267 ntBASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Gm16372-201ENSMUST00000073088 450 ntBASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ly6c1P0CW02 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms