Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.43□□□□□ -0.42
ApoeP08226 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Gm6415-201ENSMUST00000118488 348 ntBASIC12.43□□□□□ -0.42
ApoeP08226 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Gm27622-201ENSMUST00000183779 60 ntBASIC12.43□□□□□ -0.42
ApoeP08226 Gm10253-201ENSMUST00000194270 940 ntBASIC12.43□□□□□ -0.42
ApoeP08226 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Gm18206-201ENSMUST00000207027 926 ntBASIC12.43□□□□□ -0.42
ApoeP08226 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ApoeP08226 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.43□□□□□ -0.42
ApoeP08226 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ApoeP08226 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ApoeP08226 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.43□□□□□ -0.42
ApoeP08226 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
ApoeP08226 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ApoeP08226 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.42□□□□□ -0.42
ApoeP08226 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.42□□□□□ -0.42
ApoeP08226 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.42□□□□□ -0.42
ApoeP08226 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ApoeP08226 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.42□□□□□ -0.42
ApoeP08226 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ApoeP08226 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Gm5779-201ENSMUST00000218467 910 ntBASIC12.42□□□□□ -0.42
ApoeP08226 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ApoeP08226 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ApoeP08226 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ApoeP08226 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ApoeP08226 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.42□□□□□ -0.42
ApoeP08226 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ApoeP08226 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ApoeP08226 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
ApoeP08226 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Gm8410-201ENSMUST00000117225 605 ntBASIC12.41□□□□□ -0.42
ApoeP08226 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Gm25144-201ENSMUST00000179561 110 ntBASIC12.41□□□□□ -0.42
ApoeP08226 Gm25352-201ENSMUST00000179815 110 ntBASIC12.41□□□□□ -0.42
ApoeP08226 Gm3436-201ENSMUST00000179930 840 ntBASIC12.41□□□□□ -0.42
ApoeP08226 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms