Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P04224 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
P04224 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.52□□□□□ -0.56
P04224 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
P04224 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04224 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P04224 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P04224 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.52□□□□□ -0.57
P04224 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.52□□□□□ -0.57
P04224 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.52□□□□□ -0.57
P04224 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.52□□□□□ -0.57
P04224 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.52□□□□□ -0.57
P04224 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.52□□□□□ -0.57
P04224 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.52□□□□□ -0.57
P04224 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Gm27631-201ENSMUST00000184163 466 ntBASIC11.52□□□□□ -0.57
P04224 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.52□□□□□ -0.57
P04224 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.52□□□□□ -0.57
P04224 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.52□□□□□ -0.57
P04224 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
P04224 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.52□□□□□ -0.57
P04224 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P04224 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.52□□□□□ -0.57
P04224 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
P04224 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04224 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
P04224 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
P04224 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04224 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04224 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P04224 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04224 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
P04224 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
P04224 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.51□□□□□ -0.57
P04224 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P04224 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
P04224 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.51□□□□□ -0.57
P04224 Gm11779-201ENSMUST00000118541 368 ntBASIC11.51□□□□□ -0.57
P04224 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.51□□□□□ -0.57
P04224 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.51□□□□□ -0.57
P04224 Gm37714-201ENSMUST00000194742 342 ntBASIC11.51□□□□□ -0.57
P04224 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.51□□□□□ -0.57
P04224 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04224 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.51□□□□□ -0.57
P04224 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P04224 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04224 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04224 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.51□□□□□ -0.57
P04224 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
P04224 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.5□□□□□ -0.57
P04224 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms