Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CcnkO88874 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.71□□□□□ -0.53
CcnkO88874 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.71□□□□□ -0.53
CcnkO88874 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.71□□□□□ -0.53
CcnkO88874 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CcnkO88874 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
CcnkO88874 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.71□□□□□ -0.53
CcnkO88874 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.71□□□□□ -0.53
CcnkO88874 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CcnkO88874 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcnkO88874 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CcnkO88874 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CcnkO88874 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CcnkO88874 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcnkO88874 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CcnkO88874 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CcnkO88874 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CcnkO88874 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.7□□□□□ -0.54
CcnkO88874 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CcnkO88874 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Gm17837-201ENSMUST00000186435 985 ntBASIC11.7□□□□□ -0.54
CcnkO88874 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CcnkO88874 Gm10766-202ENSMUST00000194123 606 ntBASIC11.7□□□□□ -0.54
CcnkO88874 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Gm5425-201ENSMUST00000214125 459 ntBASIC11.7□□□□□ -0.54
CcnkO88874 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.7□□□□□ -0.54
CcnkO88874 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcnkO88874 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CcnkO88874 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
CcnkO88874 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms