Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Gm12390-201ENSMUST00000117897 397 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Gm4271-201ENSMUST00000174444 973 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Gm6458-201ENSMUST00000211573 635 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Gm29705-201ENSMUST00000212598 474 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.98□□□□□ -0.33
Pdlim1O70400 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim1O70400 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim1O70400 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.97□□□□□ -0.33
Pdlim1O70400 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Acot6-202ENSMUST00000222921 3622 ntBASIC12.97□□□□□ -0.33
Pdlim1O70400 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.97□□□□□ -0.33
Pdlim1O70400 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Gm29127-201ENSMUST00000188304 517 ntBASIC12.97□□□□□ -0.33
Pdlim1O70400 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.97□□□□□ -0.33
Pdlim1O70400 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.97□□□□□ -0.33
Pdlim1O70400 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Pdlim1O70400 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim1O70400 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Pdlim1O70400 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pdlim1O70400 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.96□□□□□ -0.33
Pdlim1O70400 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms