Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Gm14130-201ENSMUST00000118417 987 ntBASIC14.39□□□□□ -0.11
Trdmt1O55055 Gm15547-201ENSMUST00000122152 333 ntBASIC14.39□□□□□ -0.11
Trdmt1O55055 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.39□□□□□ -0.11
Trdmt1O55055 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Gm8885-201ENSMUST00000189382 598 ntBASIC14.39□□□□□ -0.11
Trdmt1O55055 Gm19931-201ENSMUST00000198920 368 ntBASIC14.39□□□□□ -0.11
Trdmt1O55055 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trdmt1O55055 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdmt1O55055 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm11439-201ENSMUST00000118598 409 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm12058-201ENSMUST00000118614 437 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trdmt1O55055 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm27341-201ENSMUST00000183570 106 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm43138-201ENSMUST00000199123 708 ntBASIC14.38□□□□□ -0.11
Trdmt1O55055 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trdmt1O55055 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdmt1O55055 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms