Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Mir7085-201ENSMUST00000184353 66 ntBASIC12.2□□□□□ -0.46
BckdkO55028 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
BckdkO55028 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Gm44397-201ENSMUST00000195950 113 ntBASIC12.2□□□□□ -0.46
BckdkO55028 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.2□□□□□ -0.46
BckdkO55028 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.2□□□□□ -0.46
BckdkO55028 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.2□□□□□ -0.46
BckdkO55028 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
BckdkO55028 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.19□□□□□ -0.46
BckdkO55028 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
BckdkO55028 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Gm11425-201ENSMUST00000119608 498 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Gm9396-201ENSMUST00000076703 567 ntBASIC12.19□□□□□ -0.46
BckdkO55028 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
BckdkO55028 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
BckdkO55028 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.19□□□□□ -0.46
BckdkO55028 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BckdkO55028 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
BckdkO55028 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
BckdkO55028 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
BckdkO55028 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.18□□□□□ -0.46
BckdkO55028 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.18□□□□□ -0.46
BckdkO55028 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
BckdkO55028 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
BckdkO55028 AY702102-202ENSMUST00000194651 1173 ntBASIC12.18□□□□□ -0.46
BckdkO55028 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.18□□□□□ -0.46
BckdkO55028 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.18□□□□□ -0.46
BckdkO55028 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.18□□□□□ -0.46
BckdkO55028 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
BckdkO55028 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
BckdkO55028 Gm5161-201ENSMUST00000075243 853 ntBASIC12.18□□□□□ -0.46
BckdkO55028 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
BckdkO55028 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms