Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Alx4O35137 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.72□□□□□ -0.53
Alx4O35137 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Alx4O35137 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.72□□□□□ -0.53
Alx4O35137 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Alx4O35137 Gm14822-201ENSMUST00000122247 291 ntBASIC11.72□□□□□ -0.53
Alx4O35137 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.72□□□□□ -0.53
Alx4O35137 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.72□□□□□ -0.53
Alx4O35137 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.72□□□□□ -0.53
Alx4O35137 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.72□□□□□ -0.53
Alx4O35137 Gm6888-201ENSMUST00000221983 706 ntBASIC11.72□□□□□ -0.53
Alx4O35137 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Gm8396-201ENSMUST00000057361 823 ntBASIC11.72□□□□□ -0.53
Alx4O35137 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Alx4O35137 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Alx4O35137 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Alx4O35137 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Alx4O35137 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.71□□□□□ -0.53
Alx4O35137 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.71□□□□□ -0.53
Alx4O35137 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Alx4O35137 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.71□□□□□ -0.53
Alx4O35137 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.71□□□□□ -0.53
Alx4O35137 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Alx4O35137 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Alx4O35137 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Gm27702-201ENSMUST00000184512 56 ntBASIC11.71□□□□□ -0.53
Alx4O35137 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.71□□□□□ -0.53
Alx4O35137 Gm2756-201ENSMUST00000195851 400 ntBASIC11.71□□□□□ -0.53
Alx4O35137 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.71□□□□□ -0.53
Alx4O35137 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.71□□□□□ -0.53
Alx4O35137 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.71□□□□□ -0.53
Alx4O35137 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.71□□□□□ -0.53
Alx4O35137 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Alx4O35137 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Alx4O35137 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.71□□□□□ -0.54
Alx4O35137 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Alx4O35137 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Alx4O35137 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms